admodel.h File Reference

(* $Id$)

Description not yet available. More...

#include <fvar.hpp>
#include <cifstrem.h>
#include <adstring.hpp>
#include "param_init_bounded_number_matrix.h"

Go to the source code of this file.

Classes
class	AD_matherror
	Description not yet available. More...
class	adlist_ptr
	For storing void pointers in a array. More...
class	data_3array
	Description not yet available. More...
class	data_3iarray
class	data_4array
	Description not yet available. More...
class	data_4iarray
class	data_5array
	Description not yet available. More...
class	data_imatrix
	Description not yet available. More...
class	data_int
	Description not yet available. More...
class	data_ivector
	Description not yet available. More...
class	data_matrix
	Description not yet available. More...
class	data_number
	Description not yet available. More...
class	data_vector
	Description not yet available. More...
class	dll_data_3array
	Description not yet available. More...
class	dll_data_int
	Description not yet available. More...
class	dll_data_matrix
	Description not yet available. More...
class	dll_data_number
	Description not yet available. More...
class	dll_data_vector
	Description not yet available. More...
class	dll_named_adstring
	Description not yet available. More...
class	dll_param_d3array
	Description not yet available. More...
class	dll_param_init_bounded_number
	Description not yet available. More...
class	dll_param_init_bounded_vector
	Description not yet available. More...
class	dll_param_init_d3array
	Description not yet available. More...
class	dll_param_init_matrix
	Description not yet available. More...
class	dll_param_init_number
	Description not yet available. More...
class	dll_param_init_vector
	Description not yet available. More...
class	dll_param_matrix
	Description not yet available. More...
class	dll_param_number
	Description not yet available. More...
class	dll_param_vector
	Description not yet available. More...
class	equality_constraint_vector
	Description not yet available. More...
class	function_minimizer
	Description not yet available. More...
class	inequality_constraint_vector
	Description not yet available. More...
class	init_adstring
	Description not yet available. More...
class	init_line_adstring
	Description not yet available. More...
class	initial_params
	Description not yet available. More...
class	label_class
	Description not yet available. More...
class	likeprof_params
	Description not yet available. More...
class	matrix_kludge
	Description not yet available. More...
class	model_name_tag
	Description not yet available. More...
class	named_adstring
	Description not yet available. More...
class	named_d3_array
	Description not yet available. More...
class	named_d4_array
	Description not yet available. More...
class	named_d5_array
	Description not yet available. More...
class	named_d6_array
	Description not yet available. More...
class	named_d7_array
	Description not yet available. More...
class	named_dmatrix
	Description not yet available. More...
class	named_dvar3_array
	Description not yet available. More...
class	named_dvar4_array
	Description not yet available. More...
class	named_dvar5_array
	Description not yet available. More...
class	named_dvar6_array
	Description not yet available. More...
class	named_dvar7_array
	Description not yet available. More...
class	named_dvar_matrix
	Description not yet available. More...
class	named_dvar_vector
	Description not yet available. More...
class	named_dvariable
	Description not yet available. More...
class	named_dvector
	Description not yet available. More...
class	named_i3_array
	Description not yet available. More...
class	named_i4_array
class	named_imatrix
	Description not yet available. More...
class	named_ivector
	Description not yet available. More...
class	named_line_adstring
	Description not yet available. More...
class	objective_function_value
	Description not yet available. More...
class	param_init_bounded_dev_vector
	Description not yet available. More...
class	param_init_bounded_matrix
	Description not yet available. More...
class	param_init_bounded_matrix_vector
	Description not yet available. More...
class	param_init_bounded_number
	Description not yet available. More...
class	param_init_bounded_number_vector
class	param_init_bounded_vector
	Description not yet available. More...
class	param_init_bounded_vector_vector
	Description not yet available. More...
class	param_init_d3array
	Description not yet available. More...
class	param_init_matrix
	Description not yet available. More...
class	param_init_matrix_vector
	Description not yet available. More...
class	param_init_number
	Description not yet available. More...
class	param_init_number_vector
	Description not yet available. More...
class	param_init_vector
	Description not yet available. More...
class	param_init_vector_vector
	Description not yet available. More...
class	param_likeprof_number
	Description not yet available. More...
class	param_stddev_matrix
	Description not yet available. More...
class	param_stddev_number
	Description not yet available. More...
class	param_stddev_vector
	Description not yet available. More...
class	pvm_int
	Description not yet available. More...
class	pvm_number
	Description not yet available. More...
class	pvm_params
	Description not yet available. More...
class	shareinfo
	Description not yet available. More...
class	stddev_params
	Description not yet available. More...
class	vector_kludge
	Description not yet available. More...
Defines
#define	__MINI_MAX__
#define	BIG_INIT_PARAMS
#define	param_3array   named_dvar3_array
#define	param_4array   named_dvar4_array
#define	param_5array   named_dvar5_array
#define	param_6array   named_dvar6_array
#define	param_7array   named_dvar7_array
#define	param_matrix   named_dvar_matrix
#define	param_number   named_dvariable
#define	param_vector   named_dvar_vector
#define	SPparam_3array   SPnamed_dvar3_array
#define	SPparam_4array   SPnamed_dvar4_array
#define	SPparam_matrix   SPnamed_dvar_matrix
#define	SPparam_number   SPnamed_dvariable
#define	SPparam_vector   SPnamed_dvar_vector
#define	USE_SHARE_FLAGS
Typedefs
typedef initial_params *	pinitial_params
typedef dvariable(model_parameters::*	PMF )(const dvariable &)
typedef dvariable(model_parameters::*	PMFI )(const dvariable &, int n)
typedef dvariable(model_parameters::*	PMFVI )(const dvar_vector &, int n)
typedef void(model_parameters::*	PMFVIV4 )(const dvar_vector &, int n, dvariable &f1, const dvariable &f2, const dvariable &f3, const dvariable &f4)
typedef void *	ptovoid
Functions
int	ad_get_commandline_option (const char *option_label, const int &option_value, const char *error_message)
void	ad_make_code_reentrant (void)
void	adwait (double)
dvector	bounded_multivariate_normal (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &_wght, const random_number_generator &rng)
dvector	bounded_multivariate_normal (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &lprob, random_number_generator &rng)
void	bounded_multivariate_normal_mcmc (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &wght, const dvector &y, const random_number_generator &rng)
dvector	bounded_multivariate_normal_sobol (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &lprob, const random_number_generator &rng)
dvector	bounded_multivariate_uniform (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &lprob, random_number_generator &rng)
void	bounded_multivariate_uniform_mcmc (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &wght, const dvector &y, const random_number_generator &rng)
dvector	bounded_robust_multivariate_normal (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const dmatrix &ch3, double contaminant, const double &_wght, random_number_generator &rng)
void	check_datafile_pointer (void *p)
void	cleanup_argv (int nopt, char ***pa)
void	cleanup_laplace_stuff (laplace_approximation_calculator *)
	Description not yet available.
void	copy_value_from_vector (const double &_sd, const dvector &x, const int &_ii)
void	copy_value_from_vector (const dvector &_sd, const dvector &x, const int &_ii)
void	copy_value_from_vector (const dmatrix &_sd, const dvector &x, const int &_ii)
void	copy_value_to_vector (const prevariable &x, const dvector &v, const int &ii)
void	copy_value_to_vector (const dvar_vector &x, const dvector &v, const int &ii)
void	copy_value_to_vector (const dvar_matrix &x, const dvector &v, const int &ii)
void	copy_value_to_vector (const dvar3_array &x, const dvector &v, const int &ii)
double	cumd_cauchy (const double &x)
	Description not yet available.
double	cumd_exp (double x)
double	cumd_mixture (const double &x)
double	cumd_mixture_02 (const double &x)
double	density_cauchy (const double &x)
	Description not yet available.
void	do_dll_housekeeping (int argc, char **argv)
double	ffmax (double a, double b)
double	ffmin (double a, double b)
adstring	get_reportfile_name (void)
void	get_sp_printf (void)
double	inv_cumd_cauchy (const double &x)
	Description not yet available.
double	inv_cumd_exp (double x)
double	inv_cumd_mixture (const double &y)
double	inv_cumd_mixture_02 (const double &y)
double	log_density_cauchy (const double &x)
	Description not yet available.
double	mfexp (const double)
	Robust exponential function for constant argument > 60 or < -60.
dvariable	mfexp (const prevariable &v1)
	Robust exponential function for variable argument > 60 or < -60.
dvar_vector	mfexp (const dvar_vector &)
	Description not yet available.
dvector	mfexp (const dvector &)
	Safe version of exp that interpolates values greater than equal to 60 in each element of a vector v1.
double	ndfboundp (double x, double fmin, double fmax, const double &fpen)
	Derivatative code for double nd2fboundp( double x, double fmin, double fmax,const double& fpen)
double	ndfboundp_mc (double x, double fmin, double fmax, const double &fpen)
	Description not yet available.
char **	no_dll_options (char *pname, const int &argc)
ostream &	operator<< (const ostream &s, const label_class &lc)
cifstream &	operator>> (const cifstream &s, const param_init_number &x)
cifstream &	operator>> (const cifstream &s, const param_init_vector &v)
cifstream &	operator>> (const cifstream &s, const param_init_matrix &m)
char **	parse_dll_options (char *pname, const int &argc, char *dll_options)
void	parse_dll_options (char *pname, const int &argc, char *dll_options, char ***pargv)
dvector	probing_bounded_multivariate_normal (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &lprob, double pprobe, const random_number_generator &rng)
void	probing_bounded_multivariate_normal_mcmc (int nvar, const dvector &a1, const dvector &b1, dmatrix &ch, const double &wght, const dvector &v, double pprobe, const random_number_generator &rng)
void	pvm_pack (const dvar_vector &)
void	pvm_pack (const prevariable &)
void	pvm_pack (const dvar_matrix &)
void	pvm_unpack (const dvar_vector &)
void	pvm_unpack (const prevariable &)
void	pvm_unpack (const dvar_matrix &)
void	read_covariance_matrix (const dmatrix &S, int nvar, int &hbf, dvector &sscale)
dvector	read_old_scale (int &old_nvar)
void	restore_value_from_vector (const prevariable &x, const dvector &v, const int &ii)
void	restore_value_from_vector (const dvar_vector &x, const dvector &v, const int &ii)
void	restore_value_from_vector (const dvar_matrix &x, const dvector &v, const int &ii)
void	restore_value_from_vector (dvar3_array &x, const dvector &v, const int &ii)
void	set_covariance_matrix (const dll_data_matrix &m)
void	set_covariance_matrix (const dmatrix &m)
void	set_gauss_covariance_matrix (const dll_data_matrix &m)
void	set_gauss_covariance_matrix (const dmatrix &m)
double	set_value_inv_mc (double v, double fmin, double fmax)
double	set_value_inv_mc (const prevariable &v, double fmin, double fmax)
void	set_value_inv_mc (const dvar_vector &x, const dvector &v, const int &ii, const double fmin, const double fmax)
void	set_value_mc (const dvar_vector &x, const dvar_vector &v, const int &ii, const double fmin, const double fmax)
double	set_value_mc (double z, double min, double max)
void	tracing_message (int traceflag, const char *s, int *pn)
	Description not yet available.
void	tracing_message (int traceflag, const char *s, double *pn)
	Description not yet available.
dvector	value (const param_init_number_vector &t)
dvector	value (const param_init_bounded_number_vector &t)
int	withinbound (int lb, int n, int ub)
Variables
int	AD_gaussflag
int	ADqd_flag
function_minimizer *	pfm
int	traceflag

---

Detailed Description

Description not yet available.

Definition in file admodel.h.

---

Define Documentation

#define __MINI_MAX__

Definition at line 50 of file admodel.h.

#define BIG_INIT_PARAMS

Definition at line 55 of file admodel.h.

#define param_3array   named_dvar3_array

Definition at line 72 of file admodel.h.

#define param_4array   named_dvar4_array

Definition at line 73 of file admodel.h.

#define param_5array   named_dvar5_array

Definition at line 74 of file admodel.h.

#define param_6array   named_dvar6_array

Definition at line 75 of file admodel.h.

#define param_7array   named_dvar7_array

Definition at line 76 of file admodel.h.

#define param_matrix   named_dvar_matrix

Definition at line 69 of file admodel.h.

#define param_number   named_dvariable

Definition at line 71 of file admodel.h.

#define param_vector   named_dvar_vector

Definition at line 70 of file admodel.h.

#define SPparam_3array   SPnamed_dvar3_array

Definition at line 81 of file admodel.h.

#define SPparam_4array   SPnamed_dvar4_array

Definition at line 82 of file admodel.h.

#define SPparam_matrix   SPnamed_dvar_matrix

Definition at line 78 of file admodel.h.

#define SPparam_number   SPnamed_dvariable

Definition at line 80 of file admodel.h.

#define SPparam_vector   SPnamed_dvar_vector

Definition at line 79 of file admodel.h.

#define USE_SHARE_FLAGS

Definition at line 48 of file admodel.h.

---

Typedef Documentation

typedef initial_params* pinitial_params

Definition at line 755 of file admodel.h.

typedef dvariable(model_parameters::* PMF)(const dvariable &)

Definition at line 1780 of file admodel.h.

typedef dvariable(model_parameters::* PMFI)(const dvariable &, int n)

Definition at line 1781 of file admodel.h.

typedef dvariable(model_parameters::* PMFVI)(const dvar_vector &, int n)

Definition at line 1782 of file admodel.h.

typedef void(model_parameters::* PMFVIV4)(const dvar_vector &, int n, dvariable &f1, const dvariable &f2, const dvariable &f3, const dvariable &f4)

Definition at line 1783 of file admodel.h.

typedef void* ptovoid

Definition at line 757 of file admodel.h.

---

Function Documentation

int ad_get_commandline_option	(	const char *	option_label,
		const int &	option_value,
		const char *	error_message
	)

void ad_make_code_reentrant

(

void

)

Definition at line 9 of file model33.cpp.

void adwait

(

double

)

Definition at line 31 of file model34.cpp.

Referenced by write_banner_stuff().

dvector bounded_multivariate_normal	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	_wght,
		const random_number_generator &	rng
	)

Referenced by function_minimizer::mcmc_routine().

dvector bounded_multivariate_normal	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	lprob,
		random_number_generator &	rng
	)

Definition at line 49 of file monte.cpp.

void bounded_multivariate_normal_mcmc	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	wght,
		const dvector &	y,
		const random_number_generator &	rng
	)

Definition at line 14 of file xmonte2.cpp.

Referenced by function_minimizer::mcmc_routine().

dvector bounded_multivariate_normal_sobol	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	lprob,
		const random_number_generator &	rng
	)

dvector bounded_multivariate_uniform	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	lprob,
		random_number_generator &	rng
	)

Definition at line 202 of file monte.cpp.

Referenced by function_minimizer::mcmc_routine().

void bounded_multivariate_uniform_mcmc	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	wght,
		const dvector &	y,
		const random_number_generator &	rng
	)

Definition at line 130 of file xmonte2.cpp.

Referenced by function_minimizer::mcmc_routine().

dvector bounded_robust_multivariate_normal	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const dmatrix &	ch3,
		double	contaminant,
		const double &	_wght,
		random_number_generator &	rng
	)

Definition at line 242 of file monte.cpp.

void check_datafile_pointer

(

void *

p

)

Definition at line 573 of file model.cpp.

Referenced by data_int::allocate(), init_adstring::allocate(), init_line_adstring::allocate(), data_matrix::allocate(), data_3array::allocate(), data_3iarray::allocate(), data_imatrix::allocate(), data_vector::allocate(), data_ivector::allocate(), and data_number::allocate().

void cleanup_argv	(	int	nopt,
		char ***	pa
	)

Definition at line 124 of file model33.cpp.

void cleanup_laplace_stuff

(

laplace_approximation_calculator *

l

)

Description not yet available.

Parameters:

Definition at line 2179 of file df1b2lap.cpp.

void copy_value_from_vector	(	const double &	_sd,
		const dvector &	x,
		const int &	_ii
	)

Definition at line 9 of file model42.cpp.

Referenced by copy_value_from_vector(), param_stddev_vector::get_sd_values(), param_stddev_number::get_sd_values(), and param_stddev_matrix::get_sd_values().

void copy_value_from_vector	(	const dvector &	_sd,
		const dvector &	x,
		const int &	_ii
	)

Definition at line 16 of file model42.cpp.

void copy_value_from_vector	(	const dmatrix &	_sd,
		const dvector &	x,
		const int &	_ii
	)

Definition at line 26 of file model42.cpp.

void copy_value_to_vector	(	const prevariable &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 47 of file model3.cpp.

Referenced by copy_value_to_vector().

void copy_value_to_vector	(	const dvar_vector &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 55 of file model3.cpp.

void copy_value_to_vector	(	const dvar_matrix &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 71 of file model3.cpp.

void copy_value_to_vector	(	const dvar3_array &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 83 of file model3.cpp.

double cumd_cauchy

(

const double &

x

)

Description not yet available.

Parameters:

Definition at line 17 of file cumd_cau.cpp.

double cumd_exp

(

double

x

)

Definition at line 37 of file monte.cpp.

double cumd_mixture

(

const double &

x

)

Definition at line 529 of file nmonte.cpp.

Referenced by get_bounded_mixture().

double cumd_mixture_02

(

const double &

x

)

Definition at line 517 of file nmonte.cpp.

double density_cauchy

(

const double &

x

)

Description not yet available.

Parameters:

Definition at line 29 of file cumd_cau.cpp.

void do_dll_housekeeping	(	int	argc,
		char **	argv
	)

Definition at line 160 of file model33.cpp.

double ffmax	(	double	a,
		double	b
	)

Definition at line 14 of file monte.cpp.

Referenced by bounded_multivariate_uniform(), and bounded_multivariate_uniform_mcmc().

double ffmin	(	double	a,
		double	b
	)

Definition at line 19 of file monte.cpp.

Referenced by bounded_multivariate_uniform(), and bounded_multivariate_uniform_mcmc().

adstring get_reportfile_name

(

void

)

void get_sp_printf

(

void

)

Definition at line 149 of file model33.cpp.

Referenced by do_dll_housekeeping().

double inv_cumd_cauchy

(

const double &

x

)

Description not yet available.

Parameters:

Definition at line 49 of file cumd_cau.cpp.

double inv_cumd_exp

(

double

x

)

Definition at line 25 of file monte.cpp.

double inv_cumd_mixture

(

const double &

y

)

Definition at line 556 of file nmonte.cpp.

Referenced by get_bounded_mixture(), and inv_cumd_mixture().

double inv_cumd_mixture_02

(

const double &

y

)

Definition at line 609 of file nmonte.cpp.

Referenced by inv_cumd_mixture_02().

double log_density_cauchy

(

const double &

x

)

Description not yet available.

Parameters:

Definition at line 39 of file cumd_cau.cpp.

Referenced by bounded_multivariate_normal(), bounded_multivariate_normal_mcmc(), multivariate_mixture(), new_probing_bounded_multivariate_normal(), new_probing_bounded_multivariate_normal_mcmc(), probing_bounded_multivariate_normal(), and probing_bounded_multivariate_normal_mcmc().

dvar_vector mfexp

(

const dvar_vector &

v1

)

Description not yet available.

Parameters:

Definition at line 19 of file fvar_a50.cpp.

dvector mfexp

(

const dvector &

v1

)

Safe version of exp that interpolates values greater than equal to 60 in each element of a vector v1.

Parameters:

v1	a data vector

Definition at line 18 of file dvect19.cpp.

double ndfboundp	(	double	x,
		double	fmin,
		double	fmax,
		const double &	fpen
	)

Derivatative code for double nd2fboundp( double x, double fmin, double fmax,const double& fpen)

Parameters:

x	Variable to be scaled
fmin	Lower bound of x
fmin	Upper bound of x
fpen	Unchanged on return.

Returns:

Derivative of scaled variable

Definition at line 216 of file boundfun.cpp.

Referenced by param_init_bounded_vector::mc_scale(), param_init_bounded_number::mc_scale(), param_init_bounded_matrix::mc_scale(), param_init_bounded_vector::sd_scale(), param_init_bounded_number::sd_scale(), param_init_bounded_matrix::sd_scale(), df1b2_init_bounded_number::sd_scale(), df1b2_init_bounded_vector::sd_scale(), and df1b2_init_bounded_matrix::sd_scale().

double ndfboundp_mc	(	double	x,
		double	fmin,
		double	fmax,
		const double &	fpen
	)

Description not yet available.

Parameters:

Definition at line 69 of file mc_scale.cpp.

Referenced by param_init_bounded_vector::mc_scale(), param_init_bounded_number::mc_scale(), param_init_bounded_matrix::mc_scale(), param_init_bounded_vector::sd_scale(), param_init_bounded_number::sd_scale(), df1b2_init_bounded_number::sd_scale(), and df1b2_init_bounded_vector::sd_scale().

char** no_dll_options	(	char *	pname,
		const int &	argc
	)

Definition at line 103 of file model33.cpp.

ostream& operator<<	(	const ostream &	s,
		const label_class &	lc
	)

Definition at line 43 of file model11.cpp.

cifstream& operator>>	(	const cifstream &	s,
		const param_init_number &	x
	)

Definition at line 11 of file model11.cpp.

cifstream& operator>>	(	const cifstream &	s,
		const param_init_vector &	v
	)

Definition at line 18 of file model11.cpp.

cifstream& operator>>	(	const cifstream &	s,
		const param_init_matrix &	m
	)

Definition at line 36 of file model11.cpp.

char** parse_dll_options	(	char *	pname,
		const int &	argc,
		char *	dll_options
	)

Definition at line 447 of file model33.cpp.

void parse_dll_options	(	char *	pname,
		const int &	argc,
		char *	dll_options,
		char ***	pargv
	)

Definition at line 36 of file model33.cpp.

dvector probing_bounded_multivariate_normal	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	lprob,
		double	pprobe,
		const random_number_generator &	rng
	)

void probing_bounded_multivariate_normal_mcmc	(	int	nvar,
		const dvector &	a1,
		const dvector &	b1,
		dmatrix &	ch,
		const double &	wght,
		const dvector &	v,
		double	pprobe,
		const random_number_generator &	rng
	)

Definition at line 79 of file xmonte2.cpp.

void pvm_pack

(

const dvar_vector &

)

void pvm_pack

(

const prevariable &

)

void pvm_pack

(

const dvar_matrix &

)

void pvm_unpack

(

const dvar_vector &

)

void pvm_unpack

(

const prevariable &

)

void pvm_unpack

(

const dvar_matrix &

)

void read_covariance_matrix	(	const dmatrix &	S,
		int	nvar,
		int &	hbf,
		dvector &	sscale
	)

Definition at line 1302 of file xxmcmc.cpp.

Referenced by function_minimizer::hybrid_mcmc_routine(), and function_minimizer::mcmc_routine().

dvector read_old_scale

(

int &

old_nvar

)

Definition at line 1649 of file xxmcmc.cpp.

Referenced by function_minimizer::hybrid_mcmc_routine().

void restore_value_from_vector	(	const prevariable &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 137 of file model3.cpp.

Referenced by restore_value_from_vector().

void restore_value_from_vector	(	const dvar_vector &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 146 of file model3.cpp.

void restore_value_from_vector	(	const dvar_matrix &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 163 of file model3.cpp.

void restore_value_from_vector	(	dvar3_array &	x,
		const dvector &	v,
		const int &	ii
	)

Definition at line 177 of file model3.cpp.

void set_covariance_matrix

(

const dll_data_matrix &

m

)

Definition at line 29 of file mod_sd.cpp.

void set_covariance_matrix

(

const dmatrix &

m

)

Definition at line 34 of file mod_sd.cpp.

void set_gauss_covariance_matrix

(

const dll_data_matrix &

m

)

Definition at line 19 of file mod_sd.cpp.

void set_gauss_covariance_matrix

(

const dmatrix &

m

)

Definition at line 24 of file mod_sd.cpp.

double set_value_inv_mc	(	double	v,
		double	fmin,
		double	fmax
	)

Definition at line 118 of file mod_mc3.cpp.

Referenced by param_init_bounded_number::mc_scale(), param_init_bounded_matrix::mc_scale(), param_init_bounded_vector::set_value_inv(), and set_value_inv_mc().

double set_value_inv_mc	(	const prevariable &	v,
		double	fmin,
		double	fmax
	)

Definition at line 113 of file mod_mc3.cpp.

void set_value_inv_mc	(	const dvar_vector &	x,
		const dvector &	v,
		const int &	ii,
		const double	fmin,
		const double	fmax
	)

Definition at line 137 of file mod_mc3.cpp.

void set_value_mc	(	const dvar_vector &	x,
		const dvar_vector &	v,
		const int &	ii,
		const double	fmin,
		const double	fmax
	)

Definition at line 150 of file mod_mc3.cpp.

Referenced by param_init_bounded_vector::mc_scale(), param_init_bounded_matrix::mc_scale(), ndfboundp_mc(), param_init_bounded_vector::set_value(), param_init_bounded_dev_vector::set_value(), df1b2_init_bounded_vector::set_value(), and set_value_mc().

double set_value_mc	(	double	z,
		double	min,
		double	max
	)

Definition at line 130 of file mod_mc3.cpp.

void tracing_message	(	int	_traceflag,
		const char *	s,
		int *	pn
	)

Description not yet available.

Parameters:

Definition at line 94 of file newfmin.cpp.

void tracing_message	(	int	_traceflag,
		const char *	s,
		double *	pd
	)

Description not yet available.

Parameters:

Definition at line 109 of file newfmin.cpp.

dvector value

(

const param_init_number_vector &

t

)

Definition at line 85 of file model47.cpp.

dvector value

(

const param_init_bounded_number_vector &

t

)

Definition at line 98 of file model47.cpp.

int withinbound	(	int	lb,
		int	n,
		int	ub
	)

Definition at line 54 of file model.cpp.

Referenced by initial_params::add_random_vector(), initial_params::copy_all_values(), initial_params::correct_for_dev_objects(), initial_params::get_jacobian_value(), initial_params::montecarlo_scale(), initial_params::num_active_calc(), initial_params::nvarcalc(), initial_params::reset(), initial_df1b2params::reset(), initial_params::reset1(), initial_params::restore_all_values(), initial_params::save_all(), function_minimizer::sd_routine(), initial_params::set_all_simulation_bounds(), initial_df1b2params::set_index(), initial_params::stddev_curvscale(), initial_params::stddev_scale(), initial_df1b2params::stddev_scale(), initial_params::stddev_vscale(), initial_params::xinit(), and initial_params::xinit1().

---

Variable Documentation

int AD_gaussflag

Definition at line 36 of file model.cpp.

Referenced by dll_param_matrix::allocate(), dll_param_init_matrix::allocate(), dll_data_matrix::allocate(), dll_data_matrix::~dll_data_matrix(), dll_param_init_matrix::~dll_param_init_matrix(), and dll_param_matrix::~dll_param_matrix().

int ADqd_flag

Definition at line 37 of file model.cpp.

Referenced by laplace_approximation_calculator::block_diagonal_calculations(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::inner_optimization_banded(), and function_minimizer::minimize().

function_minimizer* pfm

int traceflag

Definition at line 2794 of file admodel.h.