vnegbin.cpp

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/*
  $Id$

  Author: David Fournier
  Copyright (c) 2008-2012 Regents of the University of California
 */
#include "fvar.hpp"


  dvariable log_negbinomial_density(double x,const prevariable& mu,
    const prevariable& tau)
  {
    if (value(tau)-1.0<0.0)
    {
      cerr << "tau <=1 in log_negbinomial_density " << endl;
      ad_exit(1);
    }
    RETURN_ARRAYS_INCREMENT();
    dvariable r=mu/(1.e-120+(tau-1));
    dvariable tmp;
    tmp=gammln(x+r)-gammln(r) -gammln(x+1)
      +r*log(r)+x*log(mu)-(r+x)*log(r+mu);
    RETURN_ARRAYS_DECREMENT();
    return tmp;
  }

  dvariable negbinomial_density(double x,const prevariable& mu,
    const prevariable& tau)
  {
    if (value(tau)-1.0<=0.0)
    {
      cerr << "tau <=1 in log_negbinomial_density " << endl;
      ad_exit(1);
    }
    RETURN_ARRAYS_INCREMENT();
    dvariable r=mu/(1.e-120+(tau-1));
    dvariable tmp;
    //tmp=exp(gammln(x+r)-gammln(r) -gammln(x+1)
     // +r*log(r)+x*log(mu)-(r+x)*log(r+mu));
    tmp=gammln(x+r);
    tmp-=gammln(r);
    tmp-=gammln(x+1);
    tmp+=r*log(r);
    tmp+=x*log(mu);
    tmp-=(r+x)*log(r+mu);
    tmp=exp(tmp);


    RETURN_ARRAYS_DECREMENT();
    return tmp;
  }

  dvariable log_density_poisson(double x,const prevariable& mu)
  {
    return -mu+x*log(mu)-gammln(x+1);
  }