df11fun.cpp File Reference

(* $Id$)

#include "df11fun.h"

Go to the source code of this file.

Functions
df1_one_variable	atan (const df1_one_variable &x)
df1_one_matrix	choleski_decomp (const df1_one_matrix &MM)
df1_one_variable	exp (const df1_one_variable &x)
dvector	first_derivatives (const df1_one_vector &v)
	Description not yet available.
dmatrix	first_derivatives (const df1_one_matrix &v)
	Description not yet available.
df1_one_variable	inv (const df1_one_variable &x)
df1_one_variable	log (const df1_one_variable &x)
df1_one_variable	operator* (const df1_one_variable &x, const df1_one_variable &y)
df1_one_variable	operator* (double x, const df1_one_variable &y)
df1_one_variable	operator* (const df1_one_variable &y, double x)
df1_one_variable	operator+ (const double x, const df1_one_variable &y)
df1_one_variable	operator+ (const df1_one_variable &x, const double y)
df1_one_variable	operator+ (const df1_one_variable &x, const df1_one_variable &y)
df1_one_variable	operator- (const df1_one_variable &v)
df1_one_variable	operator- (const df1_one_variable &x, const df1_one_variable &y)
df1_one_variable	operator- (double x, const df1_one_variable &y)
df1_one_variable	operator- (const df1_one_variable &x, double y)
df1_one_variable	operator/ (const df1_one_variable &x, double y)
df1_one_variable	operator/ (const df1_one_variable &x, const df1_one_variable &y)
df1_one_variable	operator/ (const double x, const df1_one_variable &y)
void	set_derivatives (df1_one_variable &z, const df1_one_variable &x, double u, double zp)
void	set_derivatives (df1_one_variable &z, const df1_one_variable &x, const df1_one_variable &y, double u, double f_u, double f_v)
df1_one_variable	sin (const df1_one_variable &x)
df1_one_variable	sqrt (const df1_one_variable &x)
df1_one_variable	square (const df1_one_variable &x)
df1_one_variable	tan (const df1_one_variable &x)
dvector	value (const df1_one_vector &v)
dmatrix	value (const df1_one_matrix &v)
Variables
char	df12fun_notice [50] = "copyright (c) 2006 otter research ltd"

---

Function Documentation

df1_one_variable atan

(

const df1_one_variable &

x

)

Definition at line 295 of file df11fun.cpp.

Referenced by atan(), atan2(), cumd_cauchy(), dfatan1(), kludge_cumd_cauchy(), set_value_mc(), and sigmoid().

df1_one_matrix choleski_decomp

(

const df1_one_matrix &

MM

)

Definition at line 585 of file df11fun.cpp.

Referenced by laplace_approximation_calculator::banded_calculations_trust_region_approach(), calculate_importance_sample(), calculate_importance_sample_block_diagonal(), calculate_importance_sample_block_diagonal_funnel(), calculate_importance_sample_block_diagonal_option2(), calculate_importance_sample_block_diagonal_option_antithetical(), calculate_importance_sample_funnel(), choleski_decomp(), do_gauss_hermite_block_diagonal(), do_gauss_hermite_block_diagonal_multi(), laplace_approximation_calculator::do_newton_raphson_banded(), ghk(), ghk_m(), function_minimizer::hess_inv(), function_minimizer::hess_routine_noparallel_random_effects(), function_minimizer::hybrid_mcmc_routine(), ln_det_choleski(), function_minimizer::mcmc_routine(), function_minimizer::monte_carlo_routine(), read_hessian_matrix_and_scale1(), and solve().

df1_one_variable exp

(

const df1_one_variable &

x

)

Definition at line 356 of file df11fun.cpp.

dvector first_derivatives

(

const df1_one_vector &

v

)

Description not yet available.

Parameters:

Definition at line 382 of file df11fun.cpp.

Referenced by first_derivatives().

dmatrix first_derivatives

(

const df1_one_matrix &

v

)

Description not yet available.

Parameters:

Definition at line 398 of file df11fun.cpp.

df1_one_variable inv

(

const df1_one_variable &

x

)

Definition at line 367 of file df11fun.cpp.

Referenced by quadratic_prior::allocate(), calculate_importance_sample(), calculate_importance_sample_block_diagonal(), calculate_importance_sample_block_diagonal_funnel(), calculate_importance_sample_block_diagonal_option2(), calculate_importance_sample_block_diagonal_option_antithetical(), calculate_importance_sample_funnel(), do_gauss_hermite_block_diagonal(), do_gauss_hermite_block_diagonal_multi(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_block_diagonal(), function_minimizer::get_bigS(), get_solution_vector(), function_minimizer::hess_inv(), function_minimizer::hess_routine_noparallel_random_effects(), function_minimizer::mcmc_routine(), function_minimizer::monte_carlo_routine(), operator/(), quadratic_prior::operator=(), read_hessian_matrix_and_scale(), read_hessian_matrix_and_scale1(), and seldif_basis().

df1_one_variable log

(

const df1_one_variable &

x

)

Definition at line 345 of file df11fun.cpp.

df1_one_variable operator*	(	const df1_one_variable &	x,
		const df1_one_variable &	y
	)

Definition at line 428 of file df11fun.cpp.

df1_one_variable operator*	(	double	x,
		const df1_one_variable &	y
	)

Definition at line 441 of file df11fun.cpp.

df1_one_variable operator*	(	const df1_one_variable &	y,
		double	x
	)

Definition at line 451 of file df11fun.cpp.

df1_one_variable operator+	(	const double	x,
		const df1_one_variable &	y
	)

Definition at line 484 of file df11fun.cpp.

df1_one_variable operator+	(	const df1_one_variable &	x,
		const double	y
	)

Definition at line 492 of file df11fun.cpp.

df1_one_variable operator+	(	const df1_one_variable &	x,
		const df1_one_variable &	y
	)

Definition at line 502 of file df11fun.cpp.

df1_one_variable operator-

(

const df1_one_variable &

v

)

Definition at line 227 of file df11fun.cpp.

df1_one_variable operator-	(	const df1_one_variable &	x,
		const df1_one_variable &	y
	)

Definition at line 511 of file df11fun.cpp.

df1_one_variable operator-	(	double	x,
		const df1_one_variable &	y
	)

Definition at line 520 of file df11fun.cpp.

df1_one_variable operator-	(	const df1_one_variable &	x,
		double	y
	)

Definition at line 529 of file df11fun.cpp.

df1_one_variable operator/	(	const df1_one_variable &	x,
		double	y
	)

Definition at line 462 of file df11fun.cpp.

df1_one_variable operator/	(	const df1_one_variable &	x,
		const df1_one_variable &	y
	)

Definition at line 469 of file df11fun.cpp.

df1_one_variable operator/	(	const double	x,
		const df1_one_variable &	y
	)

Definition at line 476 of file df11fun.cpp.

void set_derivatives	(	df1_one_variable &	z,
		const df1_one_variable &	x,
		double	u,
		double	zp
	)

Definition at line 263 of file df11fun.cpp.

Referenced by atan(), exp(), inv(), log(), operator*(), sin(), sqrt(), square(), and tan().

void set_derivatives	(	df1_one_variable &	z,
		const df1_one_variable &	x,
		const df1_one_variable &	y,
		double	u,
		double	f_u,
		double	f_v
	)

Definition at line 270 of file df11fun.cpp.

df1_one_variable sin

(

const df1_one_variable &

x

)

Definition at line 334 of file df11fun.cpp.

df1_one_variable sqrt

(

const df1_one_variable &

x

)

Definition at line 280 of file df11fun.cpp.

df1_one_variable square

(

const df1_one_variable &

x

)

Definition at line 309 of file df11fun.cpp.

df1_one_variable tan

(

const df1_one_variable &

x

)

Definition at line 320 of file df11fun.cpp.

dvector value

(

const df1_one_vector &

v

)

Definition at line 72 of file df11fun.cpp.

Referenced by function_minimizer::adamoeba(), param_init_bounded_matrix::add_value(), funnel_init_df1b2vector::allocate(), dll_param_number::allocate(), dll_param_init_number::allocate(), quadratic_prior::allocate(), function_minimizer::amxxx(), asin(), atan(), atan2(), laplace_approximation_calculator::banded_calculations(), laplace_approximation_calculator::banded_calculations_lme(), betacf(), betai(), laplace_approximation_calculator::block_diagonal_calculations(), bounded_cumd_norm(), bounder(), boundpin(), calculate_importance_sample(), calculate_importance_sample_block_diagonal(), calculate_importance_sample_block_diagonal_funnel(), calculate_importance_sample_block_diagonal_option2(), calculate_importance_sample_block_diagonal_option_antithetical(), calculate_importance_sample_funnel(), calculate_importance_sample_shess(), calculate_laplace_approximation(), check_choleski_decomp(), choleski_decomp(), choleski_decomp_positive(), function_minimizer::computations1(), copy_value_to_vector(), cos(), cube(), cumd_exponential(), cumd_gamma(), cumd_logistic(), cumd_norm(), d1F(), d2F(), d3F(), dbinom(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), det(), dflogistic(), dmultinom(), dmvlogistic(), dnbinom(), dnbinom_tau(), dnorm(), do_evaluation(), do_gauss_hermite_block_diagonal(), do_gauss_hermite_block_diagonal_multi(), laplace_approximation_calculator::do_newton_raphson_banded(), laplace_approximation_calculator::do_one_feval(), dzinbinom(), evaluate_function(), evaluate_function_gradient(), evaluate_function_no_derivatives(), evaluate_function_quiet(), exp(), expm(), fabs(), fourth(), gammln(), gammlnguts(), gcf(), quadratic_prior::get_cgradient(), quadratic_prior::get_cHessian_from_vHessian(), laplace_approximation_calculator::get_complete_hessian(), function_minimizer::get_function_difference(), laplace_approximation_calculator::get_fx_fu(), laplace_approximation_calculator::get_gradient_for_hessian_calcs(), laplace_approximation_calculator::get_gradient_lme(), laplace_approximation_calculator::get_gradient_lme_hp(), laplace_approximation_calculator::get_hessian_components_banded_lme(), function_minimizer::get_hybrid_monte_carlo_value(), get_ln_det(), function_minimizer::get_monte_carlo_value(), laplace_approximation_calculator::get_newton_raphson_info(), laplace_approximation_calculator::get_uhat_lm_newton2(), laplace_approximation_calculator::get_uhat_quasi_newton(), laplace_approximation_calculator::get_uhat_quasi_newton_block_diagonal(), gradcalc(), gser(), init_df1_one_variable::init_df1_one_variable(), init_df1_three_variable::init_df1_three_variable(), init_df1_two_variable::init_df1_two_variable(), inv(), inv_cumd_beta_stable(), inv_cumd_exponential(), inv_cumd_gamma(), inv_cumd_norm_inner(), inv_cumd_normal_logistic_mixture(), inv_cumd_normal_mixture(), inv_cumd_t(), function_minimizer::limited_memory_quasi_newton(), function_minimizer::limited_memory_quasi_newton_block(), ln_det(), ln_det_choleski(), ln_det_choleski_error(), log_der_logistic(), log_negbinomial_density(), logistic(), lower_triangular_ln_det(), lubksb(), ludcmp(), max(), mf_upper_bound2(), mfexp(), multifan(), mvbvu_(), df1_three_variable::my_diveq(), neff(), negbinomial_density(), function_minimizer::neldmead(), nograd_assign(), nograd_assign_column(), nograd_assign_row(), nograd_assign_trans(), norm(), operator!=(), df1b2function_tweaker::operator()(), operator*(), df1_three_variable::operator*=(), operator+(), operator-(), operator/(), df1_two_variable::operator/=(), df1_three_variable::operator/=(), operator<(), operator<<(), operator<=(), quadratic_prior::operator=(), df1b2quadratic_prior::operator=(), operator==(), operator>(), operator>=(), cifstream::operator>>(), operator>>(), pow(), function_minimizer::pre_userfunction(), function_minimizer::prof_minimize(), function_minimizer::prof_minimize_re(), function_minimizer::pvm_master_get_monte_carlo_value(), function_minimizer::quasi_newton_block(), function_minimizer::random_effects_maximization(), initial_params::reset(), initial_params::reset_all(), function_minimizer::set_initial_simplex(), param_init_bounded_matrix::set_simulation_bounds(), set_value(), set_value_inv(), set_value_inv_mc(), set_value_inv_partial(), param_init_matrix::shared_set_value_inv(), param_init_d3array::shared_set_value_inv(), SIGN(), sin(), solve(), spline(), square(), sum(), laplace_approximation_calculator::test_trust_region_method(), tri_dagv(), value(), varchol(), funnel_init_bounded_df1b2vector::xinit(), funnel_init_df1b2vector::xinit(), funnel_init_df1b2matrix::xinit(), dll_param_init_matrix::~dll_param_init_matrix(), and dll_param_matrix::~dll_param_matrix().

dmatrix value

(

const df1_one_matrix &

v

)

Definition at line 131 of file df11fun.cpp.

---

Variable Documentation

char df12fun_notice[50] = "copyright (c) 2006 otter research ltd"

Definition at line 8 of file df11fun.cpp.