df1b2variable Class Reference

Description not yet available. More...

#include <df1b2fun.h>

Public Member Functions
	df1b2variable (const do_naught_kludge &)
	df1b2variable (double d)
	Description not yet available.
	df1b2variable (void)
	Default constructor.
	df1b2variable (adkludge1 *)
	Description not yet available.
	df1b2variable (const random_effects_bounded_vector_info &rebv)
	Description not yet available.
	df1b2variable (const newadkludge *)
	Description not yet available.
	df1b2variable (const df1b2variable &v)
	Description not yet available.
virtual	~df1b2variable ()
	Destructor.
void	allocate (void)
	Description not yet available.
void	allocate (const char *)
	Description not yet available.
int	allocated (void)
void	deallocate (void)
	If no other copies exist, free df1b2variable::ptr.
int &	get_ind_index (void)
const int &	get_ind_index (void) const
int	get_local_nvar (void) const
void	initialize (void)
	Initialize.
void	initialize (const unsigned int n)
	Initialize nvariables.
df1b2variable &	operator*= (const df1b2variable &v)
	Description not yet available.
df1b2variable &	operator+= (const df1b2variable &v)
	Description not yet available.
df1b2variable &	operator-= (const df1b2variable &v)
	Description not yet available.
df1b2variable &	operator/= (const df1b2variable &v)
	Description not yet available.
df1b2variable &	operator= (const df3_one_variable &v)
df1b2variable &	operator= (const df3_two_variable &v)
	Description not yet available.
df1b2variable &	operator= (const df3_three_variable &v)
	Description not yet available.
df1b2variable &	operator= (const df1b2variable &v)
	Description not yet available.
void	operator= (double x)
	Assign with value d.
int	unallocated (void)
Static Public Member Functions
static unsigned int	get_blocksize (void)
	Description not yet available.
static unsigned int	get_blocksize (const unsigned int n)
	Description not yet available.
static unsigned int	get_nvar ()
static int	get_passnumber (void)
static void	increment_adpool_counter (void)
	Description not yet available.
static void	restore_adpool_pointer (void)
	Description not yet available.
static void	save_adpool_pointer (void)
	Description not yet available.
static void	set_blocksize (void)
	Description not yet available.
static void	set_maxder (int n)
static void	set_minder (int n)
static void	set_nvar (unsigned int n)
Public Attributes
short int *	ncopies
double *	ptr
Static Public Attributes
static int	adpool_counter = 0
static unsigned int	adpool_nvar_stack []
static adpool *	adpool_stack []
static int	adpool_stack_pointer = 0
static const int	adpool_stack_size = 50
static int	adpool_use_index []
static adpool *	adpool_vector []
static const int	adpool_vectorsize = _FIVE_
static int	allocation_counter = 0
static unsigned int	blocksize = 0
static int	current_allocation_index = 0
static int	maxder = 0
static int	minder = 0
static int	noallocate = 0
static unsigned int	nvar = 0
static unsigned int	nvar_vector []
static int	passnumber = 0
static adpool *	pool = new adpool()
static int	pool_allocation_number []

---

Detailed Description

Description not yet available.

Parameters:

Definition at line 251 of file df1b2fun.h.

---

Constructor & Destructor Documentation

df1b2variable::df1b2variable

(

const do_naught_kludge &

)

[inline]

Definition at line 296 of file df1b2fun.h.

df1b2variable::df1b2variable

(

double

d

)

Description not yet available.

Parameters:

Definition at line 51 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

void

)

Default constructor.

Definition at line 78 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

adkludge1 *

adkludgexxx

)

Description not yet available.

Parameters:

Definition at line 151 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

const random_effects_bounded_vector_info &

rebv

)

Description not yet available.

Parameters:

Definition at line 1013 of file df1b2fn2.cpp.

df1b2variable::df1b2variable

(

const newadkludge *

z

)

Description not yet available.

Parameters:

Definition at line 103 of file df1b2fn5.cpp.

df1b2variable::df1b2variable

(

const df1b2variable &

v

)

Description not yet available.

Parameters:

Definition at line 198 of file df1b2fn2.cpp.

df1b2variable::~df1b2variable

(

)

[virtual]

Destructor.

Definition at line 279 of file df1b2fn2.cpp.

---

Member Function Documentation

void df1b2variable::allocate

(

void

)

Description not yet available.

Parameters:

Reimplemented in re_objective_function_value, and funnel_init_df1b2variable.

Definition at line 123 of file df1b2fn5.cpp.

Referenced by allocate(), df1b2_init_number::allocate(), df1b2_init_bounded_number::allocate(), df1b2variable(), and init_df1b2vector::reallocate().

void df1b2variable::allocate

(

const char *

s

)

Description not yet available.

Parameters:

Reimplemented in re_objective_function_value.

Definition at line 285 of file df1b2f15.cpp.

int df1b2variable::allocated

(

void

)

[inline]

Definition at line 256 of file df1b2fun.h.

Referenced by operator=().

void df1b2variable::deallocate

(

void

)

If no other copies exist, free df1b2variable::ptr.

Definition at line 286 of file df1b2fn2.cpp.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_hessian_type(), laplace_approximation_calculator::check_hessian_type2(), laplace_approximation_calculator::get_newton_raphson_info_banded(), and ~df1b2variable().

unsigned int df1b2variable::get_blocksize

(

void

)

[static]

Description not yet available.

Parameters:

Definition at line 70 of file df1b2fn2.cpp.

Referenced by initialize(), and set_blocksize().

unsigned int df1b2variable::get_blocksize

(

const unsigned int

n

)

[static]

Description not yet available.

Parameters:

Definition at line 79 of file df1b2fn2.cpp.

int& df1b2variable::get_ind_index

(

void

)

[inline]

Reimplemented in df1b2_init_number.

Definition at line 289 of file df1b2fun.h.

Referenced by allocate(), df1b2variable(), funnel_init_bounded_df1b2vector::funnel_init_bounded_df1b2vector(), funnel_init_df1b2variable::funnel_init_df1b2variable(), funnel_init_df1b2vector::funnel_init_df1b2vector(), operator=(), and init_df1b2variable::operator=().

const int& df1b2variable::get_ind_index

(

void

)

const [inline]

Definition at line 290 of file df1b2fun.h.

int df1b2variable::get_local_nvar

(

void

)

const [inline]

Definition at line 255 of file df1b2fun.h.

static unsigned int df1b2variable::get_nvar

(

)

[inline, static]

Definition at line 283 of file df1b2fun.h.

Referenced by set_blocksize().

static int df1b2variable::get_passnumber

(

void

)

[inline, static]

Definition at line 281 of file df1b2fun.h.

Referenced by test_smartlist::check_buffer_size(), fixed_smartlist::check_buffer_size(), fixed_smartlist2::check_buffer_size(), fixed_smartlist::operator++(), fixed_smartlist2::operator++(), test_smartlist::operator+=(), fixed_smartlist::operator+=(), and fixed_smartlist2::operator+=().

void df1b2variable::increment_adpool_counter

(

void

)

[static]

Description not yet available.

Parameters:

Definition at line 24 of file df1b2glo.cpp.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), and laplace_approximation_calculator::laplace_approximation_calculator().

void df1b2variable::initialize

(

void

)

Initialize.

Definition at line 129 of file df1b2fn2.cpp.

Referenced by allocate(), df1b2variable(), operator=(), init_df1b2variable::operator=(), and init_df1b2variable::set_u_dot().

void df1b2variable::initialize

(

const unsigned int

n

)

Initialize nvariables.

/param n nvariables

Definition at line 146 of file df1b2fn2.cpp.

df1b2variable & df1b2variable::operator*=

(

const df1b2variable &

v

)

Description not yet available.

Parameters:

Definition at line 434 of file df1b2fun.cpp.

df1b2variable & df1b2variable::operator+=

(

const df1b2variable &

_x

)

Description not yet available.

Parameters:

Definition at line 129 of file df1b2fn3.cpp.

df1b2variable & df1b2variable::operator-=

(

const df1b2variable &

_x

)

Description not yet available.

Parameters:

Definition at line 25 of file df1b2fn8.cpp.

df1b2variable & df1b2variable::operator/=

(

const df1b2variable &

v

)

Description not yet available.

Parameters:

Definition at line 443 of file df1b2fun.cpp.

df1b2variable & df1b2variable::operator=

(

const df3_one_variable &

v

)

Definition at line 749 of file df3fun.cpp.

Referenced by funnel_dependent_df1b2variable::funnel_dependent_df1b2variable(), re_objective_function_value::operator=(), and funnel_init_df1b2variable::set_value().

df1b2variable & df1b2variable::operator=

(

const df3_two_variable &

v

)

Description not yet available.

Parameters:

Definition at line 1257 of file df32fun.cpp.

df1b2variable & df1b2variable::operator=

(

const df3_three_variable &

v

)

Description not yet available.

Parameters:

Definition at line 49 of file df33fun.cpp.

df1b2variable & df1b2variable::operator=

(

const df1b2variable &

_x

)

Description not yet available.

Parameters:

Reimplemented in re_objective_function_value, df1b2_init_number, and funnel_dependent_df1b2variable.

Definition at line 30 of file df1b2fn4.cpp.

void df1b2variable::operator=

(

double

d

)

Assign with value d.

Parameters:

d

new value

Reimplemented in re_objective_function_value, and init_df1b2variable.

Definition at line 33 of file df1b2fn5.cpp.

void df1b2variable::restore_adpool_pointer

(

void

)

[static]

Description not yet available.

Parameters:

Definition at line 55 of file df1b2fun.cpp.

void df1b2variable::save_adpool_pointer

(

void

)

[static]

Description not yet available.

Parameters:

Definition at line 40 of file df1b2fun.cpp.

void df1b2variable::set_blocksize

(

void

)

[static]

Description not yet available.

Parameters:

Definition at line 89 of file df1b2fn2.cpp.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), and laplace_approximation_calculator::laplace_approximation_calculator().

static void df1b2variable::set_maxder

(

int

n

)

[inline, static]

Definition at line 285 of file df1b2fun.h.

Referenced by laplace_approximation_calculator::laplace_approximation_calculator().

static void df1b2variable::set_minder

(

int

n

)

[inline, static]

Definition at line 284 of file df1b2fun.h.

Referenced by laplace_approximation_calculator::laplace_approximation_calculator().

static void df1b2variable::set_nvar

(

unsigned int

n

)

[inline, static]

Definition at line 282 of file df1b2fun.h.

Referenced by laplace_approximation_calculator::laplace_approximation_calculator().

int df1b2variable::unallocated

(

void

)

[inline]

Definition at line 257 of file df1b2fun.h.

---

Member Data Documentation

int df1b2variable::adpool_counter = 0 [static]

Definition at line 264 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), check_pool_depths(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), increment_adpool_counter(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), and function_minimizer::trust_region_update().

unsigned int df1b2variable::adpool_nvar_stack [static]

Definition at line 269 of file df1b2fun.h.

Referenced by restore_adpool_pointer(), and save_adpool_pointer().

adpool * df1b2variable::adpool_stack [static]

Definition at line 268 of file df1b2fun.h.

Referenced by restore_adpool_pointer(), and save_adpool_pointer().

int df1b2variable::adpool_stack_pointer = 0 [static]

Definition at line 270 of file df1b2fun.h.

Referenced by restore_adpool_pointer(), and save_adpool_pointer().

const int df1b2variable::adpool_stack_size = 50 [static]

Definition at line 266 of file df1b2fun.h.

Referenced by save_adpool_pointer().

int df1b2variable::adpool_use_index [static]

Definition at line 260 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all().

adpool * df1b2variable::adpool_vector [static]

Definition at line 267 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), check_pool_depths(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), laplace_approximation_calculator::do_separable_stuff(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), and function_minimizer::trust_region_update().

const int df1b2variable::adpool_vectorsize = _FIVE_ [static]

Definition at line 263 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), and laplace_approximation_calculator::check_pool_size().

int df1b2variable::allocation_counter = 0 [static]

Definition at line 262 of file df1b2fun.h.

unsigned int df1b2variable::blocksize = 0 [static]

Definition at line 278 of file df1b2fun.h.

Referenced by df1b2variable(), and set_blocksize().

int df1b2variable::current_allocation_index = 0 [static]

Definition at line 259 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all().

int df1b2variable::maxder = 0 [static]

Definition at line 277 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), laplace_approximation_calculator::get_complete_hessian(), laplace_approximation_calculator::get_newton_raphson_info(), get_second_ders(), init_df1b2variable::init_df1b2variable(), init_df1b2variable::operator=(), set_maxder(), and init_df1b2variable::set_u_dot().

int df1b2variable::minder = 0 [static]

Definition at line 276 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), laplace_approximation_calculator::get_complete_hessian(), laplace_approximation_calculator::get_newton_raphson_info(), get_second_ders(), init_df1b2variable::init_df1b2variable(), init_df1b2variable::operator=(), set_minder(), and init_df1b2variable::set_u_dot().

short int* df1b2variable::ncopies

Definition at line 291 of file df1b2fun.h.

Referenced by allocate(), deallocate(), df1b2variable(), and operator=().

int df1b2variable::noallocate = 0 [static]

Definition at line 279 of file df1b2fun.h.

Referenced by df1b2_init_number::allocate(), df1b2variable(), funnel_init_bounded_df1b2vector::funnel_init_bounded_df1b2vector(), funnel_init_df1b2matrix::funnel_init_df1b2matrix(), funnel_init_df1b2vector::funnel_init_df1b2vector(), df1b2vector::noallocate(), and df1b2quadratic_prior::operator=().

unsigned int df1b2variable::nvar = 0 [static]

Definition at line 275 of file df1b2fun.h.

Referenced by allocate(), funnel_init_var::allocate_all(), asin(), laplace_approximation_calculator::check_pool_size(), check_second_derivatives(), check_third_derivatives(), cos(), df1b2variable(), div(), laplace_approximation_calculator::do_separable_stuff(), gammlnguts(), get_blocksize(), get_hessian(), get_local_nvar(), get_nvar(), initialize(), inv_cumd_beta_stable(), inv_cumd_gamma(), inv_cumd_normal_logistic_mixture(), inv_cumd_normal_mixture(), mypow(), operator*(), operator+(), operator+=(), operator-(), operator-=(), operator/(), operator=(), pow(), print_derivatives(), read_pass1_1(), read_pass1_1_dv(), read_pass1_1x(), read_pass1_2(), read_pass1_2_dv(), read_pass1_2x(), read_pass1_3(), read_pass1_3_dv(), read_pass1_3x(), read_pass1_eq_1(), read_pass1_eq_2(), read_pass1_eq_3(), read_pass1_init_1(), read_pass1_init_2(), read_pass1_init_3(), read_pass1_minus_eq_1(), read_pass1_minus_eq_2(), read_pass1_minus_eq_3(), read_pass1_plus_eq_1(), read_pass1_plus_eq_2(), read_pass1_plus_eq_3(), read_pass2_1(), read_pass2_1_dvdv(), read_pass2_1_dvdvdv(), read_pass2_1_minus(), read_pass2_1_minuscv(), read_pass2_1_minusvc(), read_pass2_1_prod(), read_pass2_1_prod_vector(), read_pass2_1_prodc1(), read_pass2_1_prodc2(), read_pass2_1_sum(), read_pass2_1_sumc(), read_pass2_2(), read_pass2_2_dvdv(), read_pass2_2_dvdvdv(), read_pass2_2_minus(), read_pass2_2_minuscv(), read_pass2_2_minusvc(), read_pass2_2_prod(), read_pass2_2_prod_vector(), read_pass2_2_prodc1(), read_pass2_2_prodc2(), read_pass2_2_sum(), read_pass2_2_sumc(), read_pass2_3(), read_pass2_3_dvdv(), read_pass2_3_dvdvdv(), read_pass2_3_minus(), read_pass2_3_minuscv(), read_pass2_3_minusvc(), read_pass2_3_prod(), read_pass2_3_prod_vector(), read_pass2_3_prodc1(), read_pass2_3_prodc2(), read_pass2_3_sum(), read_pass2_3_sumc(), read_tilde_values_1(), read_tilde_values_2(), read_tilde_values_3(), restore_adpool_pointer(), save_adpool_pointer(), set_dependent_variable(), set_nvar(), sin(), df1b2_gradlist::write_pass1(), df1b2_gradlist::write_pass1_prod(), and df1b2_gradlist::write_pass1x().

unsigned int df1b2variable::nvar_vector [static]

Definition at line 273 of file df1b2fun.h.

Referenced by funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), and function_minimizer::trust_region_update().

int df1b2variable::passnumber = 0 [static]

Definition at line 274 of file df1b2fun.h.

Referenced by ad_read_pass1(), ad_read_pass1_der_values(), ad_read_pass1_eq(), ad_read_pass1_initialize(), ad_read_pass1_minus_eq(), ad_read_pass1_plus_eq(), ad_read_pass1x(), ad_read_pass2(), ad_read_pass2_dvdv(), ad_read_pass2_dvdvdv(), ad_read_pass2_minus(), ad_read_pass2_minuscv(), ad_read_pass2_minusvc(), ad_read_pass2_prod(), ad_read_pass2_prod_vector(), ad_read_pass2_prodc1(), ad_read_pass2_prodc2(), ad_read_pass2_sum(), ad_read_pass2_sumc(), ad_read_write_tilde_values(), laplace_approximation_calculator::default_calculations(), laplace_approximation_calculator::default_calculations_check_derivatives(), df1b2_gradcalc1(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_banded(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_banded_adjoint(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_block_diagonal(), laplace_approximation_calculator::do_separable_stuff_laplace_approximation_importance_sampling_adjoint(), laplace_approximation_calculator::do_separable_stuff_newton_raphson_banded(), laplace_approximation_calculator::do_separable_stuff_newton_raphson_block_diagonal(), laplace_approximation_calculator::do_separable_stuff_x_u_block_diagonal(), laplace_approximation_calculator::get_block_diagonal_hessian(), laplace_approximation_calculator::get_complete_hessian(), get_newton_raphson_info(), laplace_approximation_calculator::get_newton_raphson_info(), get_passnumber(), get_second_ders(), and print_derivatives().

adpool * df1b2variable::pool = new adpool() [static]

Definition at line 258 of file df1b2fun.h.

Referenced by allocate(), funnel_init_var::allocate_all(), laplace_approximation_calculator::check_pool_size(), cleanup_laplace_stuff(), df1b2variable(), laplace_approximation_calculator::do_separable_stuff(), laplace_approximation_calculator::laplace_approximation_calculator(), function_minimizer::limited_memory_quasi_newton_block(), function_minimizer::prof_minimize_re(), function_minimizer::quasi_newton_block(), restore_adpool_pointer(), save_adpool_pointer(), set_blocksize(), function_minimizer::trust_region_update(), and laplace_approximation_calculator::~laplace_approximation_calculator().

int df1b2variable::pool_allocation_number [static]

Definition at line 261 of file df1b2fun.h.

double* df1b2variable::ptr

Definition at line 254 of file df1b2fun.h.

Referenced by allocate(), allocated(), deallocate(), df1b2variable(), get_local_nvar(), initialize(), operator=(), and unallocated().

List of all members.

---

The documentation for this class was generated from the following files:

• df1b2fun.h (* $Id$)
• df1b2f15.cpp (* $Id$)
• df1b2fn2.cpp (* $Id$)
• df1b2fn3.cpp (* $Id$)
• df1b2fn4.cpp (* $Id$)
• df1b2fn5.cpp (* $Id$)
• df1b2fn8.cpp (* $Id$)
• df1b2fun.cpp (* $Id$)
• df1b2glo.cpp (* $Id$)
• df32fun.cpp (* $Id$)
• df33fun.cpp (* $Id$)
• df3fun.cpp (* $Id$)