, including all inherited members.
active(const initial_params &ip) | initial_params | [friend] |
active_flag | initial_params | [protected] |
add_random_vector(const dvector &x) | initial_params | [static] |
add_random_vector(const dvector &y, const dvector &x, const double &ll, const dvector &diag) | initial_params | [static] |
add_to_list(void) | initial_params | [virtual] |
add_value(const dvector &, const dvector &, const int &, const double &, const dvector &) | param_init_vector | [private, virtual] |
add_value(const dvector &, const int &) | param_init_vector | [private, virtual] |
allocate(int imin, int imax, int phasestart=1, const char *s="UNNAMED") | param_init_vector | [private] |
allocate(const ad_integer &imin, const ad_integer &imax, const ad_integer &phasestart=1, const char *s="UNNAMED") | param_init_vector | [private] |
allocate(int imin, int imax, const char *s="UNNAMED") | param_init_vector | [private] |
allocate(int imin, int imax, const ivector &ishare, const char *s="UNNAMED") | param_init_vector | [private] |
named_dvar_vector::allocate(const char *s) | named_dvar_vector | [protected] |
named_dvar_vector::dvar_vector::allocate(int, int) | dvar_vector | |
named_dvar_vector::dvar_vector::allocate(void) | dvar_vector | |
named_dvar_vector::dvar_vector::allocate(const dvector &) | dvar_vector | |
named_dvar_vector::dvar_vector::allocate(const dvar_vector &) | dvar_vector | |
named_dvar_vector::dvar_vector::allocate(const ad_integer &, const ad_integer &) | dvar_vector | |
initial_params::allocate(int _phase_start) | initial_params | |
allocatec(const dvar_vector &) | dvar_vector | |
array_size class | dvar_vector | [friend] |
banded_lower_triangular_dmatrix class | dvar_vector | [friend] |
banded_lower_triangular_dvar_matrix class | dvar_vector | [friend] |
banded_symmetric_dmatrix class | dvar_vector | [friend] |
banded_symmetric_dvar_matrix class | dvar_vector | [friend] |
bsave_value(uostream &uos) | param_init_vector | [private, virtual] |
copy_all_values(const dvector &x, const int &ii) | initial_params | [static] |
copy_status(const ostream &s, const dvar_vector &v) | dvar_vector | [friend] |
copy_value_to_vector(const dvector &x, const int &ii) | param_init_vector | [private, virtual] |
correct_for_dev_objects(const dmatrix &H) | initial_params | [static] |
current_phase | initial_params | [static] |
curv_scale(const dvector &d, const dvector &x, const int &) | param_init_vector | [private, virtual] |
deallocate() | dvar_vector | |
dev_correction(const dmatrix &H, const int &ii) | param_init_vector | [virtual] |
dvar3_array class | dvar_vector | [friend] |
dvar_matrix class | dvar_vector | [friend] |
dvar_vector(const dvar_vector &) | dvar_vector | |
dvar_vector(const predvar_vector &) | dvar_vector | |
dvar_vector() | dvar_vector | |
dvar_vector(int ncl, int ncu) | dvar_vector | |
dvar_vector(int ncl, int ncu, kkludge_object) | dvar_vector | |
dvar_vector(unsigned int sz, double *x) | dvar_vector | |
dvar_vector(const independent_variables &) | dvar_vector | |
dvar_vector(const param_init_number_vector &) | dvar_vector | |
dvar_vector(const param_init_bounded_number_vector &) | dvar_vector | |
dvar_vector(const dvector &) | dvar_vector | |
dvar_vector(const char *) | dvar_vector | |
elem(int i) | dvar_vector | [inline] |
elem(int i) const | dvar_vector | [inline] |
elem_div(const dvar_vector &, const dvar_vector &) | dvar_vector | [friend] |
elem_div(const dvector &, const dvar_vector &) | dvar_vector | [friend] |
elem_div(const dvar_vector &, const dvector &) | dvar_vector | [friend] |
elem_prod(const dvar_vector &, const dvar_vector &) | dvar_vector | [friend] |
elem_prod(const dvector &, const dvar_vector &) | dvar_vector | [friend] |
elem_prod(const dvar_vector &, const dvector &) | dvar_vector | [friend] |
elem_value(int i) | dvar_vector | [inline] |
elem_value(int i) const | dvar_vector | [inline] |
exp(const dvar_vector &) | dvar_vector | [friend] |
fabs(const dvar_vector &) | dvar_vector | [friend] |
fform(const char *, const dvar_vector &) | dvar_vector | [friend] |
fill(const char *) | dvar_vector | |
fill_multinomial(const int &seed, const dvector &p) | dvar_vector | |
fill_multinomial(const random_number_generator &rng, const dvector &p) | dvar_vector | |
fill_randbi(long int &n, double) | dvar_vector | |
fill_randbi_ni(long int &n, double) | dvar_vector | |
fill_randn(long int &n) | dvar_vector | |
fill_randn_ni(long int &n) | dvar_vector | |
fill_randnegbinomial(double lambda, double tau, const random_number_generator &rng) | dvar_vector | |
fill_randpoisson(double lambda, const random_number_generator &rng) | dvar_vector | |
fill_randu(long int &n) | dvar_vector | |
fill_randu_ni(long int &n) | dvar_vector | |
fill_seqadd(double, double) | dvar_vector | |
first_difference(const dvar_vector &) | dvar_vector | [friend] |
function_minimizer class | initial_params | [friend] |
get_initial_value(void) | initial_params | |
get_jacobian(const dvector &, const dvector &, const int &) | param_init_vector | [private, virtual] |
get_jacobian_value(const dvector &y, const dvector &jac) | initial_params | [static] |
get_name(void) | model_name_tag | [inline] |
get_phase_start(void) | initial_params | |
get_reportfile_name(void) | initial_params | [static] |
get_scalefactor() | initial_params | |
get_va() | dvar_vector | [inline] |
get_va() const | dvar_vector | [inline] |
hess_scale(const dvector &, const dvector &, const int &) | param_init_vector | [inline, private, virtual] |
index_max | dvar_vector | |
index_min | dvar_vector | |
indexmax() const | dvar_vector | [inline] |
indexmin() const | dvar_vector | [inline] |
initial_params(void) | initial_params | |
initial_value | initial_params | [protected] |
initial_value_flag | initial_params | [protected] |
initialize(const dvector &ww) | dvar_vector | |
initialize(void) | dvar_vector | |
initpointer(void) | dvar_vector | [inline] |
initpointer(void) const | dvar_vector | [inline] |
label(void) | param_init_vector | [virtual] |
link_ptr | dvar_vector | |
log(const dvar_vector &) | dvar_vector | [friend] |
make_indvar_list(const dvar_vector &) | dvar_vector | [friend] |
max_num_initial_params | initial_params | [static] |
max_number_phases | initial_params | [static] |
mc_phase | initial_params | [static] |
mc_scale(const dvector &d, const dvector &x, const int &) | param_init_vector | [private, virtual] |
mceval_phase | initial_params | [static] |
model_name_tag(void) | model_name_tag | [inline] |
model_parameters class | param_init_vector | [friend] |
montecarlo_scale(const dvector &d, const dvector &x) | initial_params | [static] |
name | model_name_tag | [protected] |
named_dvar_vector(void) | named_dvar_vector | [inline, protected] |
norm(const dvar_vector &) | dvar_vector | [friend] |
norm2(const dvar_vector &) | dvar_vector | [friend] |
num_active_calc(void) | initial_params | [static] |
num_active_initial_params | initial_params | [static] |
num_initial_params | initial_params | [static] |
nvarcalc() | initial_params | [static] |
nvarcalc_all(void) | initial_params | [static] |
operator!(void) const | dvar_vector | [inline] |
operator()(int lb, int ub) | dvar_vector | [inline] |
operator()(int i) | dvar_vector | [inline] |
operator()(int i) const | dvar_vector | [inline] |
operator()(const lvector &) | dvar_vector | |
operator()(const ivector &u) | dvar_vector | |
operator*(const dvar_matrix &m1, const dmatrix &m2) | dvar_vector | [friend] |
operator*(const dvar_vector &, const dvar_vector &) | dvar_vector | [friend] |
operator*(const dvector &, const dvar_vector &) | dvar_vector | [friend] |
operator*(const dvar_vector &, const dvector &) | dvar_vector | [friend] |
operator*(const prevariable &, const dvar_vector &) | dvar_vector | [friend] |
operator*(const prevariable &, const dvector &) | dvar_vector | [friend] |
operator*(double, const dvar_vector &) | dvar_vector | [friend] |
operator*(const dvar_vector &, const dmatrix &) | dvar_vector | [friend] |
operator*(const dmatrix &, const dvar_vector &) | dvar_vector | [friend] |
operator*(const dvar_vector &, const dvar_matrix &) | dvar_vector | [friend] |
operator*(const dvar_matrix &, const dvar_vector &) | dvar_vector | [friend] |
operator*(const dvar_matrix &, const dvar_matrix &) | dvar_vector | [friend] |
operator*(const dmatrix &, const dvar_matrix &) | dvar_vector | [friend] |
operator*=(const prevariable &d) | dvar_vector | |
operator*=(double d) | dvar_vector | |
operator+(const dvar_vector &, const dvar_vector &) | dvar_vector | [friend] |
operator+(const dvar_vector &, const dvector &) | dvar_vector | [friend] |
operator+(const dvector &, const dvar_vector &) | dvar_vector | [friend] |
operator++(void) | dvar_vector | [inline] |
operator+=(const prevariable &d) | dvar_vector | |
operator+=(double d) | dvar_vector | |
operator+=(const dvector &v1) | dvar_vector | |
operator+=(const dvar_vector &v1) | dvar_vector | |
operator-() | dvar_vector | |
operator-(const dvar_vector &, const dvar_vector &) | dvar_vector | [friend] |
operator-(const dvector &, const dvar_vector &) | dvar_vector | [friend] |
operator-(const dvar_vector &, const dvector &) | dvar_vector | [friend] |
operator--(void) | dvar_vector | [inline] |
operator-=(const prevariable &d) | dvar_vector | |
operator-=(double d) | dvar_vector | |
operator-=(const dvector &v1) | dvar_vector | |
operator-=(const dvar_vector &v1) | dvar_vector | |
operator/=(const prevariable &d) | dvar_vector | |
operator/=(double d) | dvar_vector | |
operator=(const dvector &) | param_init_vector | |
operator=(const dvar_vector &) | param_init_vector | |
operator=(const prevariable &) | param_init_vector | |
operator=(const double &) | param_init_vector | |
named_dvar_vector::operator=(const double m) | named_dvar_vector | [protected] |
operator[](int i) | dvar_vector | [inline] |
operator[](int i) const | dvar_vector | [inline] |
param_init_vector() | param_init_vector | |
param_init_vector_vector class | param_init_vector | [friend] |
phase_save | initial_params | |
phase_start | initial_params | |
phase_stop | initial_params | |
pvm_pack(void) | param_init_vector | [inline, virtual] |
pvm_unpack(void) | param_init_vector | [inline, virtual] |
read(void) | initial_params | [static] |
read_from(const istream &) | dvar_vector | |
read_from(const uistream &) | dvar_vector | |
report_value(void) | param_init_vector | [private] |
reset(const dvar_vector &x) | initial_params | [static] |
reset(const dvector &x) | initial_params | [static] |
reset(const dvar_vector &x, const dvector &pen) | initial_params | [static] |
reset1(const dvar_vector &x, const dvector &g) | initial_params | [static] |
reset_all(const dvar_vector &x, const dvector &pen) | initial_params | [static] |
restart_phase | initial_params | [static] |
restore(const ifstream &ifs) | initial_params | [static] |
restore_all_values(const dvector &x, const int &ii) | initial_params | [static] |
restore_phase_start(void) | initial_params | |
restore_start_phase(void) | initial_params | [static] |
restore_value(const ifstream &ifs) | param_init_vector | [private, virtual] |
restore_value_from_vector(const dvector &, const int &) | param_init_vector | [private, virtual] |
save(void) | initial_params | [static] |
save(const ofstream &ofs, int prec) | initial_params | [static] |
save_all(const ofstream &_ofs, int prec, const dvector &g) | initial_params | [static] |
save_dvar_vector_position(void) const | dvar_vector | |
save_dvar_vector_value(void) const | dvar_vector | |
save_value(ofstream &ofs) | param_init_vector | [private, virtual] |
save_value(const ofstream &ofs, int prec) | param_init_vector | [private, virtual] |
save_value(const ofstream &ofs, int prec, const dvector &, int &offset) | param_init_vector | [private, virtual] |
scalefactor | initial_params | [protected] |
sd_phase | initial_params | [static] |
sd_scale(const dvector &d, const dvector &x, const int &) | param_init_vector | [private, virtual] |
sd_vscale(const dvar_vector &d, const dvar_vector &x, const int &ii) | param_init_vector | [private, virtual] |
second_difference(const dvar_vector &) | dvar_vector | [friend] |
set_active_flag(void) | initial_params | |
set_active_only_random_effects(void) | initial_params | [static] |
set_active_random_effects(void) | initial_params | [static] |
set_all_simulation_bounds(const dmatrix &symbds) | initial_params | [static] |
set_all_simulation_bounds(const dmatrix &symbds, const dvector &) | initial_params | [static] |
set_inactive_flag(void) | initial_params | |
set_inactive_only_random_effects(void) | initial_params | [static] |
set_inactive_random_effects(void) | initial_params | [static] |
set_initial_value(double x) | initial_params | |
set_only_random_effects_active() | initial_params | [virtual] |
set_only_random_effects_inactive() | initial_params | [virtual] |
set_phase_start(int x) | initial_params | |
set_random_effects_active() | initial_params | [virtual] |
set_random_effects_inactive() | initial_params | [virtual] |
set_scalefactor(const double) | initial_params | |
set_simulation_bounds(const dmatrix &symbds, const int &ii) | param_init_vector | [private, virtual] |
set_value(const dvar_vector &x, const int &ii, const dvariable &pen) | param_init_vector | [private, virtual] |
set_value_inv(const dvector &x, const int &ii) | param_init_vector | [private, virtual] |
setshare(const index_type &sf, const index_type &af) | param_init_vector | [virtual] |
sfabs(const dvar_vector &) | dvar_vector | [friend] |
shallow_copy(const dvar_vector &) | dvar_vector | |
shape | dvar_vector | |
share_flags | initial_params | [protected] |
shared_set_value(const dvar_vector &, const int &, const dvariable &pen) | param_init_vector | [virtual] |
shared_set_value_inv(const dvector &, const int &) | param_init_vector | [virtual] |
shared_size_count(void) | param_init_vector | [virtual] |
shift(int min) | dvar_vector | |
sigmoid(const dvar_vector &t1) | dvar_vector | [friend] |
sin(const dvar_vector &) | dvar_vector | [friend] |
size() const | dvar_vector | [inline] |
size_count(void) | param_init_vector | [private, virtual] |
stddev_curvscale(const dvector &d, const dvector &x) | initial_params | [static] |
stddev_scale(const dvector &d, const dvector &x) | initial_params | [static] |
stddev_vscale(const dvar_vector &d, const dvar_vector &x) | initial_params | [static] |
straight_through_flag | initial_params | [static] |
sub(int lb, int ub) | dvar_vector | [inline] |
sumsq(const dvar_vector &) | dvar_vector | [friend] |
va | dvar_vector | |
value(const dvar_vector &v1) | dvar_vector | [friend] |
varsptr | initial_params | [static] |
write_on(const ostream &) const | dvar_vector | |
write_on(const uostream &) const | dvar_vector | |
xinit(const dvector &x) | initial_params | [static] |
xinit1(const dvector &x, const dvector &g) | initial_params | [static] |
xinit_all(const dvector &x) | initial_params | [static] |
~dvar_vector() | dvar_vector | |
~initial_params() | initial_params | [protected, virtual] |